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Fmoc analysis of solid-supported amine

SyntheticPage 121

Submitted: August 22, 2001, published: August 22, 2001

Authors

A contribution from 

Reaction Scheme

Chemicals

Fmoc-glycine (Novabiochem);
amino-functionalised resin (primary or secondary);
Hexafluorophosphate (o-(7-azabenzo-
triazol-1-yl)-1,1,3,3-tetramethyluronium (HATU, Aldrich);
Diisopropylethylamine (DIPEA, any source).

Procedure

1. Coupling of Fmoc-Gly to resin Take about 50 mg of resin (eg. 0.8 mmol/g, 1 eq, 0.04 mmol) swell in 1 mL DCM. Add Fmoc-glycine (5 eq, 60 mg) and DIPEA (10 eq, 70 uL) to DCM (1 mL). Add DCC (42 mg, 5 eq) and stir for 10 min. Add solution to resin and leave few hours to overnight. Wash resin with DMF, Methanol, DCM and dry in vacuo thoroughly. Fmoc removal: Accurately weigh out about 20 mg of dry resin and shake in 1.0 mL of 20% piperidine/DMF for 30 min. Take 50 uL of solution and dilute to 1 mL with 20% piperidine/DMF. Obtain UV standard (background) using same 20% piperidine/DMF solution. Obtain UV of Fmoc solution (1 mL in cell) Read value at 300nm and obtain value in absorbency units, AUFS). To calculate the "Fmoc number" (ie the loading in mmol/g of Fmoc glycine on the resin) take the value from the UV machine and multiply by 106. Divide this value by (7800x50xmass of resin in mg). For greater accuracy perform the test on a couple of samples and take an average.

Author Comments

There are many important factors to consider in this procedure. Firstly the calculation above: 7800 is the extinction coefficient (units mol-1dm3cm-1) for the Fmoc cleavage product at this wavelength. 106 accounts for the change in units to mmol and from mL to dm3. 50 is the dilution factor. A good reading from the UV machine should lie between about 0.3 and 1.2 Absorbency units. Too weak or too strong a sample will give innaccurate results; adjust the dilution factor to lie in this range and then adjust the calculation accordingly. Remember, the "Fmoc number" is not the loading of your starting resin, but of the resin coupled to Fmoc glycine. To calculate the original loading use the formula shown in the scheme. If you are likely to perform many such tests then it is quite helpful to set-up an Excel spreadsheet to allow for quick Fmoc number calculation and then also the subsequent loading. Finally it is worth remembering exactly what an FMoc number is telling you. It realy tells you how well Fmoc glycine couples on to the resin and then how well the Fmoc group is released. The Fmoc cleavage should be very close to quantitative but what about the coupling reaction? This procedure does at least say something about the available loading and also the reactivity of your amine. It does not mean of course that the next acid you choose to couple to this resin will do so with the same loading as Fmoc glycine, but you as least have a good idea as what to expect. It's often worthwhile checking the loading of a manufacturer's resin in this way before trusting the value on the bottle. The Novabiochem catalogue provides much useful infomation on basic solid phase techniques.

Data

N/A

Lead Reference

Novabiochem catalogue 2000 page I1 and references therein.

Keywords