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Nucleophilic Aromatic Substitution of 5-fluoro-1-indanone with morpholine; 5-morpholino-1-indanone

SyntheticPage 738
DOI: 10.1039/SP738
Submitted Apr 21, 2014, published Apr 23, 2014
Adam Glass (glassac@plu.edu), Max Mayther (maythemf@plu.edu), Dylan Nehrenburg (nehrenda@plu.edu), Drew Huff (huffdb@plu.edu)
A contribution from GlassLab, Pacific Lutheran University


			Reaction Scheme: <IMG src="/images/empty.gif"><IMG src="/images/empty.gif"><IMG src="/images/empty.gif">Nucleophilic Aromatic Substitution of <SPAN id=csm1398242478541 class="csm-chemical-name csm-not-validated" title=5-fluoro-1-indanone grpid="1">5-fluoro-1-indanone</SPAN> with <SPAN id=csm1398242485975 class=csm-chemical-name title=morpholine grpid="2">morpholine</SPAN><IMG src="/images/empty.gif"><IMG src="/images/empty.gif"><IMG src="/images/empty.gif">

Chemicals Used

5-fluoro-1-indanone( 99% Sigma Aldrich)

morpholine (99+% Aldrich Chemical Company)

Procedure

The synthesis was performed using standard Schlenk techniques under a nitrogen atmosphere.  To a dried and nitrogen flushed glass microwave reaction vial was added  5-flouro-1-indanone (0.101 g, 0.67 mmol).  The vial's atmosphere was cycled four times. Morpholine (2.0 mL, 0.023 mol, 3.47 equivs.) was added, The reaction was then sealed and heated to 100 oC for 20 hours under variable watt microwave heating.  At the completion of the reaction the crude material was transferred to a 50 mL round bottom flask using 3.5 mL ethyl acetate. Silica and ethyl acetate (4.5 mL) were added to the flask and the solvent was removed under reduced pressure to yield a free flowing dry load.  The crude product was then subjected to purification via flash chromatography (75 : 25 ethyl acetate : hexanes) to yield a red solid (144 mg, 98.7%).  

 

We also ran a larger scale reaction (500 mg 1-indanone, 0.0033 mole) to test scale up.  We observed a reduced yield isolating 523 mg in a 73% yield.  

Author's Comments

  • The reaction discussed in the lead reference, implementing DMSO as a solvent and a reaction time of three hours, was found to be irreproducible by our group.  We observed only trace conversion using this process.
  • Basic silica was critical to obtain a reproducible yield and pure product.  An basic alumina/silica blend was most effective.
  • We used a Biotage Emrys Personal Chemistry Optimizer Microwave Synthesizer for microwave heating.
  • Conventional heating was also shown to work, though the reaction times were increased, slightly.
  • Trace amounts of the enamine have been characterized as the only minor impurity present.
  • Synthesis of 5-morpholino-1-indanone via 5-chloro-1-indanone proved unsuccessful via this approach.  The enamine was obtained as the major product. 
  • We have found that a variable solvent purification works best.  Running a nonpolar mix to remove the enamine and they switching to higher polarity to remove the desired product.

Data

1H NMR:  (CDCl3) δ ppm 2.59-2.62 (m, 2H), 3.01 (t, J=5.7 Hz, 2H), 3.30 (t, J=5.0 Hz, 4H), 3.83 (t, J=4.7 Hz, 4H), 6.78 (m, 6.78-6.79, 1H), 6.83-6.86 (m, 1H), 7.61 (d, J=8.8 Hz, 1H).

 

13C NMR:  (CDCl3) δ ppm 25.8, 36.3, 47.6, 66.4, 109.7, 114.0, 124.9, 128.2, 155.8, 157.7, 204.9

 

GCMS EI [M+]  Predicted: 217.2, Actual: 217


Lead Reference

Chern, C.-Y.; Yek, Y.-L.; Chen, Y.-L.; Kan, W.-M. J. Chin. Chem. Soc. 2008, 55, 846–853.

Other References

Dinges, J.; Albert, D.H.; Arnold, L.D.; Ashworth, K.L.; et al J. Med Chem. 2007, 50, 2011-2029

Supplementary Information

5-morpholino-1-indanone 1H.ESP
5-morpholino-1-indanone 13C.esp
5-morpholino-1-indanone-1H.pdf
5-morpholino-1-indanone-13C.pdf
GCMS Data 5-morpholino-1-indanone.pdf

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Keywords: amines, aromatics/arenes, heterocyclic compounds, nucleophilic, substitution

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